Foldseek enables fast and sensitive comparisons of large structure sets.
C 1.3k 164
Compressing protein structures effectively with torsion angles
C++ 199 25
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
C++ 187 17
Multiple Protein Structure Alignment at Scale with FoldMason
C 284 31
Fast indexing and search of discontinuous motifs in protein structures
Rust 224 27
RNA search
C 55 4
Big Fantastic Virus Database (BFVD): Code used for analyses
Regression test for foldseek
UFCG: Universal Fungal Core Genes
An Interactive, Terminal-Native Protein Structure Viewer
Open source code for AlphaFold.