ont

Worldwide wiki on how to access, change and edit ONTs

CLI tool for flexible and fast adaptive sampling on ONT sequencers

Assembly and intrahost/low-frequency variant calling for viral samples

Original & most popular Helm Chart / Container for GenieACS

ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling

ClairS-TO - a deep-learning method for tumor-only somatic variant calling

Unifi UDM Pro Iszo XPON UNO Verizon FiOS

Exploit Huawei ONT device, only support r019. You need to compile kernel module getshell.ko for r018 or r017 by yourself.

Clair3-RNA - a long-read small variant caller for RNA sequencing data

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

GUI for inspecting POD5 files

Basecalling configuration prediction from FASTQ files

This tool decrypts and encrypts configuration file downloaded from the ONT's web interface

start shell scripts on hs8145x6 with full root privilege

Extract methylation calls from long reads (ONT/ PacBio)

ITS region extraction for long-read amplicon sequencing

DDM-grade telemetry from HSGQ/ODI GPON SFP ONUs over SSH - Prometheus exporter + Grafana dashboard

A comprehensive C++ telomere annotation tool for genome assemblies and reads.

Notes and scripts on Airtel's Dasan H680GM-A XPON ONT / Router

A comprehensive DNA methylation atlas for the Chinese population through nanopore long-read sequencing of 106 individuals