rescience

📓 Code for "Fluctuation Domains in Adaptive Evolution", published in TPB

Replicating a Multi-Functional Synthetic Gene Network

A unified, from-scratch PyTorch zoo of 9 entity-alignment models (JAPE, GCN-Align, BootEA, NAEA, KECG, AliNet, MRAEA, RREA, DGMC) reproduced on DBP15K — one data layer, one metrics module, one trainer pattern, with paper-vs-repo results and documented deviations.

Reference outputs of lulcc 1.0.4 (R) for the Plum Island Ecosystems application of Moulds et al. (2015), generated in a pinned Docker image, for replication in ReScience C

Code associated with the article "[Rp] Dendrodendritic inhibition and simulated odor responses in a detailed olfactory bulb network model"

[Re] lulcc (Moulds et al., 2015): replication of the Plum Island Ecosystems application in Python with DisSModel and DisSLUCC, for ReScience C

ReScience C website

Replication article for ReScience C: [Re] A Standard Computable General Equilibrium (CGE) Model in GAMS (Lofgren, Harris and Robinson 2002), reimplemented in Python as pystdcge and checked against IFPRI's GAMS program

ReScience C publication — three-way information-theoretic analysis of transfer functions; a replication of Smyth, Phillips & Kay (1996).

Replication of Glass and Sun (1994) submitted to ReScience C

Repository for the reproduction of Faircal, as published in ReScience C volume 9 issue 2

ReScience C submissions

Replicating the figure that launched a thousand touchscreens. A hands-on reproduction of Fitts (1954) in Python.